miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|167811640|gb|CU657150.1|CU657150 AGGACCGTGAAACTTCTTAGAATTCCATCGGATATGTTTTTTAAGAGACGGTATGGTTGTCATGCAATGATGCTGGAAAC
AGTGGCAGCTGTTCCTGGTATGGTAGGAGGAATGCTGCTGCACCTAAGGTCTCTCCGCAAGTTCCAGCAAAGTGGCGGTT
GGATCAAAGCCCTGCTTGAAGAAGCAGAGAATGAGAGGATGCACTTGATGACCATGGTGGAACTTGTACAGCCCAAGTGG
TATGAAAGACTTCTGGTTCTTGCTGTGCAGGGAGTCTTCTTCAATGGCTTCTTTGGTGTATATCTTCTCTCCCCCAAACT
GGCCCATAGAATTGTTGGTTACCTGGAGGAGGAAGCAGTATACTCATATACAGAGTATTTGAAGGAAATTGATAGTGGTG
CAATTGAAAATGTTCCGGCTCCTGCTATTGCAATGGACTACTGGAAGCTACCCAAGGATGCAACCCTTAAGGATGTTATA
ATTGTAATTCGTGCTGATGAAGCTCACCATCGGGAGCTTAACCATTTTGCTGCTGACATTCACTTTCAGGGAAAGGAATT
GAGAGAGGCACCAGCCCCTGTTGGTTATCACTAAGATGTAATCTG




Most similar to sp|Q41266|AOX2_SOYBN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q41266|AOX2_SOYBN Alternative oxidase 2, mitochondrial
           OS=Glycine max GN=AOX2 PE=1 SV=2
          Length = 333

 Score =  345 bits (886), Expect = 1e-94
 Identities = 166/197 (84%), Positives = 182/197 (92%)
 Frame = +1

Query: 1   RTVKLLRIPSDMFFKRRYGCHAMMLETVAAVPGMVGGMLLHLRSLRKFQQSGGWIKALLE 180
           RTVKLLRIP+D+FFKRRYGC AMMLETVAAVPGMVGGMLLHLRSLRKFQQSGGWIKALLE
Sbjct: 137 RTVKLLRIPTDLFFKRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQQSGGWIKALLE 196

Query: 181 EAENERMHLMTMVELVQPKWYERLLVLAXXXXXXXXXXXXYLLSPKLAHRIVGYLEEEAV 360
           EAENERMHLMTMVELV+PKWYERLLVLA            Y+LSPK+AHRIVGYLEEEA+
Sbjct: 197 EAENERMHLMTMVELVKPKWYERLLVLAVQGVFFNAFFVLYILSPKVAHRIVGYLEEEAI 256

Query: 361 YSYTEYLKEIDSGAIENVPAPAIAMDYWKLPKDATLKDVIIVIRADEAHHRELNHFAADI 540
           +SYTEYLK+++SGAIENVPAPAIA+DYW+LPKDA LKDVI VIRADEAHHR++NHFA+DI
Sbjct: 257 HSYTEYLKDLESGAIENVPAPAIAIDYWRLPKDARLKDVITVIRADEAHHRDVNHFASDI 316

Query: 541 HFQGKELREAPAPVGYH 591
           HFQGKELREAPAP+GYH
Sbjct: 317 HFQGKELREAPAPIGYH 333